Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM3O75382 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM3O75382 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM3O75382 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 AC108073.2-201ENST00000464002 357 ntBASIC15.7■□□□□ 0.1
TRIM3O75382 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM3O75382 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM3O75382 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 TERC-201ENST00000602385 541 ntBASIC15.7■□□□□ 0.1
TRIM3O75382 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM3O75382 FAM197Y3-203ENST00000618346 717 ntBASIC15.7■□□□□ 0.1
TRIM3O75382 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM3O75382 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM3O75382 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM3O75382 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TRIM3O75382 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM3O75382 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM3O75382 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM3O75382 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 AL591424.1-201ENST00000442569 1213 ntBASIC15.69■□□□□ 0.1
TRIM3O75382 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM3O75382 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 AC140113.2-201ENST00000604370 208 ntBASIC15.69■□□□□ 0.1
TRIM3O75382 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.69■□□□□ 0.1
TRIM3O75382 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 GGTLC5P-201ENST00000617623 998 ntBASIC15.69■□□□□ 0.1
TRIM3O75382 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM3O75382 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM3O75382 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.69■□□□□ 0.1
TRIM3O75382 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM3O75382 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM3O75382 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM3O75382 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM3O75382 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM3O75382 MED15P5-201ENST00000423150 992 ntBASIC15.68■□□□□ 0.1
TRIM3O75382 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 PRSS29P-201ENST00000440800 595 ntBASIC15.68■□□□□ 0.1
TRIM3O75382 POLD2P1-201ENST00000511220 997 ntBASIC15.68■□□□□ 0.1
TRIM3O75382 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms