Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 HMGA1P7-201ENST00000406908 502 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AC093909.1-201ENST00000504731 1122 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AC145285.3-201ENST00000564603 959 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 Z83851.2-201ENST00000609564 659 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 DOC2GP-204ENST00000639052 2548 ntBASIC16.11■□□□□ 0.17
PRAMEF4O60810 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
PRAMEF4O60810 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRAMEF4O60810 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 HCG4-201ENST00000418983 998 ntBASIC16.1■□□□□ 0.17
PRAMEF4O60810 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PRAMEF4O60810 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRAMEF4O60810 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.09■□□□□ 0.17
PRAMEF4O60810 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 KRT18P2-201ENST00000447938 1258 ntBASIC16.09■□□□□ 0.17
PRAMEF4O60810 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 MIR4515-201ENST00000584082 81 ntBASIC16.09■□□□□ 0.17
PRAMEF4O60810 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 AC010507.1-201ENST00000633895 436 ntBASIC16.09■□□□□ 0.17
PRAMEF4O60810 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PRAMEF4O60810 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 AC104109.2-201ENST00000602919 1418 ntBASIC16.09■□□□□ 0.17
PRAMEF4O60810 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRAMEF4O60810 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms