Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.85■□□□□ 0.61
SORBS3O60504 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.85■□□□□ 0.61
SORBS3O60504 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SORBS3O60504 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SORBS3O60504 AC108860.2-201ENST00000562760 2183 ntBASIC18.85■□□□□ 0.61
SORBS3O60504 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SORBS3O60504 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
SORBS3O60504 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.85■□□□□ 0.61
SORBS3O60504 WASH6P-202ENST00000359512 1437 ntBASIC18.84■□□□□ 0.61
SORBS3O60504 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 LINC01225-203ENST00000563550 1244 ntBASIC18.84■□□□□ 0.61
SORBS3O60504 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.84■□□□□ 0.61
SORBS3O60504 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.84■□□□□ 0.61
SORBS3O60504 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.84■□□□□ 0.61
SORBS3O60504 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.84■□□□□ 0.61
SORBS3O60504 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SORBS3O60504 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SORBS3O60504 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SORBS3O60504 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.84■□□□□ 0.61
SORBS3O60504 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SORBS3O60504 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SORBS3O60504 PCDHB17P-201ENST00000539533 2393 ntBASIC18.84■□□□□ 0.61
SORBS3O60504 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SORBS3O60504 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SORBS3O60504 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.84■□□□□ 0.61
SORBS3O60504 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SORBS3O60504 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SORBS3O60504 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.83■□□□□ 0.61
SORBS3O60504 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.83■□□□□ 0.61
SORBS3O60504 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.83■□□□□ 0.61
SORBS3O60504 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SORBS3O60504 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SORBS3O60504 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.83■□□□□ 0.6
SORBS3O60504 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.83■□□□□ 0.6
SORBS3O60504 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.83■□□□□ 0.6
SORBS3O60504 AC109635.5-201ENST00000533593 962 ntBASIC18.83■□□□□ 0.6
SORBS3O60504 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SORBS3O60504 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.83■□□□□ 0.6
SORBS3O60504 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SORBS3O60504 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.83■□□□□ 0.6
SORBS3O60504 AL390955.2-201ENST00000603032 514 ntBASIC18.83■□□□□ 0.6
SORBS3O60504 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 AP001350.2-201ENST00000625104 1094 ntBASIC18.83■□□□□ 0.6
SORBS3O60504 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SORBS3O60504 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SORBS3O60504 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 AC060834.1-201ENST00000443027 2032 ntBASIC18.83■□□□□ 0.6
SORBS3O60504 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SORBS3O60504 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SORBS3O60504 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.82■□□□□ 0.6
SORBS3O60504 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.82■□□□□ 0.6
SORBS3O60504 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SORBS3O60504 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.82■□□□□ 0.6
SORBS3O60504 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms