Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 AP3S2-216ENST00000617003 1561 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 GPR53P-205ENST00000457298 1084 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 AC022494.1-201ENST00000466044 728 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 HLA-V-204ENST00000476601 1289 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.13□□□□□ -0.63
RTL8CO15255 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 AC091167.2-201ENST00000579581 588 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.13□□□□□ -0.63
RTL8CO15255 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.13□□□□□ -0.63
RTL8CO15255 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
RTL8CO15255 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 AC133963.1-201ENST00000504166 1679 ntBASIC11.13□□□□□ -0.63
RTL8CO15255 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.13□□□□□ -0.63
RTL8CO15255 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.13□□□□□ -0.63
RTL8CO15255 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RTL8CO15255 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC11.13□□□□□ -0.63
RTL8CO15255 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.12□□□□□ -0.63
RTL8CO15255 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
RTL8CO15255 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 AC009477.1-201ENST00000452936 217 ntBASIC11.12□□□□□ -0.63
RTL8CO15255 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 AC105233.2-201ENST00000523697 349 ntBASIC11.12□□□□□ -0.63
RTL8CO15255 AF228730.5-201ENST00000530288 346 ntBASIC11.12□□□□□ -0.63
RTL8CO15255 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.12□□□□□ -0.63
RTL8CO15255 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.12□□□□□ -0.63
RTL8CO15255 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.12□□□□□ -0.63
RTL8CO15255 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.12□□□□□ -0.63
RTL8CO15255 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
RTL8CO15255 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RTL8CO15255 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.11□□□□□ -0.63
RTL8CO15255 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RTL8CO15255 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.11□□□□□ -0.63
RTL8CO15255 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
RTL8CO15255 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RTL8CO15255 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RTL8CO15255 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms