Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN3O00409 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN3O00409 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.95■□□□□ 0.46
FOXN3O00409 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
FOXN3O00409 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FOXN3O00409 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FOXN3O00409 SLC25A6P4-201ENST00000586535 553 ntBASIC17.95■□□□□ 0.46
FOXN3O00409 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.95■□□□□ 0.46
FOXN3O00409 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN3O00409 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN3O00409 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FOXN3O00409 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN3O00409 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
FOXN3O00409 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXN3O00409 GGT4P-201ENST00000623672 1708 ntBASIC17.95■□□□□ 0.46
FOXN3O00409 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXN3O00409 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXN3O00409 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXN3O00409 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 AC098831.1-202ENST00000438821 336 ntBASIC17.94■□□□□ 0.46
FOXN3O00409 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 AC009078.2-202ENST00000463353 338 ntBASIC17.94■□□□□ 0.46
FOXN3O00409 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXN3O00409 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXN3O00409 AC087641.1-201ENST00000557561 1021 ntBASIC17.94■□□□□ 0.46
FOXN3O00409 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
FOXN3O00409 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
FOXN3O00409 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXN3O00409 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
FOXN3O00409 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FOXN3O00409 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 CYP2T1P-202ENST00000641596 2535 ntBASIC17.93■□□□□ 0.46
FOXN3O00409 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
FOXN3O00409 FAM185BP-201ENST00000443595 716 ntBASIC17.93■□□□□ 0.46
FOXN3O00409 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
FOXN3O00409 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FOXN3O00409 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.93■□□□□ 0.46
FOXN3O00409 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXN3O00409 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 ACTL9-202ENST00000612068 1252 ntBASIC17.93■□□□□ 0.46
FOXN3O00409 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.93■□□□□ 0.46
FOXN3O00409 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXN3O00409 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 HLA-A-201ENST00000376802 1334 ntBASIC17.93■□□□□ 0.46
FOXN3O00409 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXN3O00409 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms