Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
O00370 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
O00370 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 AL391256.1-201ENST00000443260 1855 ntBASIC17.89■□□□□ 0.45
O00370 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
O00370 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 KRT18P2-201ENST00000447938 1258 ntBASIC17.89■□□□□ 0.45
O00370 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
O00370 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.89■□□□□ 0.45
O00370 AC096734.2-201ENST00000562054 433 ntBASIC17.89■□□□□ 0.45
O00370 AC140113.2-201ENST00000604370 208 ntBASIC17.89■□□□□ 0.45
O00370 AC027601.4-201ENST00000611259 610 ntBASIC17.89■□□□□ 0.45
O00370 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
O00370 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.89■□□□□ 0.45
O00370 AC006277.1-201ENST00000624348 1610 ntBASIC17.89■□□□□ 0.45
O00370 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
O00370 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.89■□□□□ 0.45
O00370 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.89■□□□□ 0.45
O00370 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.89■□□□□ 0.45
O00370 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.89■□□□□ 0.45
O00370 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
O00370 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
O00370 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
O00370 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
O00370 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
O00370 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
O00370 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
O00370 RHOQP3-201ENST00000437982 621 ntBASIC17.88■□□□□ 0.45
O00370 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
O00370 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
O00370 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.88■□□□□ 0.45
O00370 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.88■□□□□ 0.45
O00370 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.88■□□□□ 0.45
O00370 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.88■□□□□ 0.45
O00370 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.88■□□□□ 0.45
O00370 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.88■□□□□ 0.45
O00370 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.88■□□□□ 0.45
O00370 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.88■□□□□ 0.45
O00370 AC131009.4-201ENST00000624048 1740 ntBASIC17.88■□□□□ 0.45
O00370 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.88■□□□□ 0.45
O00370 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.88■□□□□ 0.45
O00370 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
O00370 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
O00370 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.87■□□□□ 0.45
O00370 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
O00370 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.87■□□□□ 0.45
O00370 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 AL591424.1-201ENST00000442569 1213 ntBASIC17.87■□□□□ 0.45
O00370 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.87■□□□□ 0.45
O00370 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
O00370 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.87■□□□□ 0.45
O00370 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
O00370 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.87■□□□□ 0.45
O00370 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
O00370 FAM197Y3-203ENST00000618346 717 ntBASIC17.87■□□□□ 0.45
O00370 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms