Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AC107918.2-201ENST00000530817 355 ntBASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AC124947.2-201ENST00000547118 1133 ntBASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AC004835.2-201ENST00000603762 682 ntBASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AC027612.4-201ENST00000605371 583 ntBASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NPIPA3F8WFD2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AC002056.1-201ENST00000395613 760 ntBASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AC105339.1-204ENST00000636249 355 ntBASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 AL645728.2-201ENST00000641974 660 ntBASIC15.27■□□□□ 0.04
NPIPA3F8WFD2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA3F8WFD2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC092053.1-201ENST00000605787 1936 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AC004461.1-201ENST00000412461 403 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 TSEN15P1-201ENST00000423257 515 ntBASIC15.26■□□□□ 0.03
NPIPA3F8WFD2 AL645939.2-201ENST00000427340 991 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms