Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NACAE9PAV3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NACAE9PAV3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
NACAE9PAV3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 AC105020.1-201ENST00000435356 2205 ntBASIC12.34□□□□□ -0.43
NACAE9PAV3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
NACAE9PAV3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.34□□□□□ -0.43
NACAE9PAV3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.34□□□□□ -0.43
NACAE9PAV3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 AC243591.1-201ENST00000452967 1364 ntBASIC12.34□□□□□ -0.43
NACAE9PAV3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 AC078925.2-201ENST00000624013 1973 ntBASIC12.34□□□□□ -0.43
NACAE9PAV3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 AL135999.2-201ENST00000622438 1686 ntBASIC12.34□□□□□ -0.43
NACAE9PAV3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
NACAE9PAV3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.34□□□□□ -0.43
NACAE9PAV3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NACAE9PAV3 AC092171.3-201ENST00000610122 2651 ntBASIC12.34□□□□□ -0.43
NACAE9PAV3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NACAE9PAV3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
NACAE9PAV3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.33□□□□□ -0.44
NACAE9PAV3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.33□□□□□ -0.44
NACAE9PAV3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.33□□□□□ -0.44
NACAE9PAV3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.33□□□□□ -0.44
NACAE9PAV3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.33□□□□□ -0.44
NACAE9PAV3 AC148477.8-201ENST00000624298 468 ntBASIC12.33□□□□□ -0.44
NACAE9PAV3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
NACAE9PAV3 SIGLEC16-201ENST00000599858 1437 ntBASIC12.33□□□□□ -0.44
NACAE9PAV3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 INTS4P1-201ENST00000438455 1935 ntBASIC12.33□□□□□ -0.44
NACAE9PAV3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.33□□□□□ -0.44
NACAE9PAV3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
NACAE9PAV3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms