Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 AP002383.4-201ENST00000442518 975 ntBASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM49D1C9J1S8 AC011270.2-201ENST00000624293 2550 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 LINC00265-3P-201ENST00000447588 903 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AP002414.4-201ENST00000589764 1148 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 TERC-201ENST00000602385 541 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AC073592.4-201ENST00000623827 446 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AL596087.1-201ENST00000400979 1969 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AL590787.1-201ENST00000568856 1315 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 GGT3P-204ENST00000453783 1664 ntBASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM49D1C9J1S8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AL596257.1-201ENST00000641463 2694 ntBASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC074051.2-201ENST00000565115 352 ntBASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM49D1C9J1S8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms