Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 AL671277.1-201ENST00000429656 993 ntBASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 AL161645.1-201ENST00000622716 1255 ntBASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YJEFN3A6XGL0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC016027.1-202ENST00000607927 1699 ntBASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC009053.2-201ENST00000563701 2365 ntBASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 HLA-J-202ENST00000469281 1241 ntBASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 AL031731.1-201ENST00000642131 2094 ntBASIC17.43■□□□□ 0.38
YJEFN3A6XGL0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 AC004967.1-201ENST00000453589 447 ntBASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 RARRES2P8-201ENST00000566335 367 ntBASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 GPALPP1-207ENST00000611650 899 ntBASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 AL691403.2-201ENST00000618460 490 ntBASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
YJEFN3A6XGL0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms