Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC067930.6-201ENST00000623257 4947 ntBASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC103564.2-201ENST00000432853 1299 ntBASIC18.25■□□□□ 0.51
CCDC66A2RUB6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 AC005915.1-201ENST00000624912 2018 ntBASIC18.25■□□□□ 0.51
CCDC66A2RUB6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC66A2RUB6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AL645929.1-201ENST00000420084 975 ntBASIC18.24■□□□□ 0.51
CCDC66A2RUB6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC104076.2-201ENST00000448912 469 ntBASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC063952.2-201ENST00000498792 1227 ntBASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC111152.3-201ENST00000569699 673 ntBASIC18.24■□□□□ 0.51
CCDC66A2RUB6 AC010331.1-201ENST00000611423 582 ntBASIC18.24■□□□□ 0.51
CCDC66A2RUB6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC66A2RUB6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 AC092053.1-201ENST00000605787 1936 ntBASIC18.23■□□□□ 0.51
CCDC66A2RUB6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC66A2RUB6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms