Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC022188.1-201ENST00000620960 1664 ntBASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV7S3A2A0A539 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 KRT8P39-201ENST00000396270 1433 ntBASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 AC107918.2-201ENST00000530817 355 ntBASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 AL596087.1-201ENST00000400979 1969 ntBASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRBV7S3A2A0A539 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC024909.3-201ENST00000611513 2257 ntBASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRBV7S3A2A0A539 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 AC131009.4-201ENST00000624048 1740 ntBASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV7S3A2A0A539 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms