Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 AL589987.1-201ENST00000453380 819 ntBASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 SDHAP3-202ENST00000515467 728 ntBASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC061975.2-201ENST00000581722 295 ntBASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC099568.2-201ENST00000609194 695 ntBASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LOC102724428A0A0B4J2F2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 MIR4259-201ENST00000584466 101 ntBASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 AL512343.1-201ENST00000605837 169 ntBASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.06■□□□□ 0.96
LOC102724428A0A0B4J2F2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 AL589702.1-201ENST00000641229 1509 ntBASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC098850.1-201ENST00000419919 790 ntBASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 TMEM14DP-201ENST00000422205 345 ntBASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 MEP1AP4-201ENST00000423244 1087 ntBASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 AC024267.1-201ENST00000582320 895 ntBASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.05■□□□□ 0.96
LOC102724428A0A0B4J2F2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LOC102724428A0A0B4J2F2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms