Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC187A0A096LP49 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 NOC2LP2-201ENST00000407594 1944 ntBASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 KRT17P7-201ENST00000451704 1104 ntBASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CETN4P-206ENST00000642099 2168 ntBASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC187A0A096LP49 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 FAM220BP-201ENST00000377689 816 ntBASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC187A0A096LP49 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms