Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HCFC2Q9Y5Z7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
HCFC2Q9Y5Z7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HCFC2Q9Y5Z7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HCFC2Q9Y5Z7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 INE1-201ENST00000456273 945 ntBASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
HCFC2Q9Y5Z7 AC018470.1-201ENST00000624790 3129 ntBASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AL138688.1-201ENST00000624851 1594 ntBASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AP006294.1-201ENST00000415407 339 ntBASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.38■□□□□ 0.37
HCFC2Q9Y5Z7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HCFC2Q9Y5Z7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms