Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 AC063926.3-201ENST00000624734 5658 ntBASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 AC100803.2-201ENST00000562459 1963 ntBASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
R3HCC1Q9Y3T6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 LINC01711-201ENST00000598340 967 ntBASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.29■□□□□ 0.68
R3HCC1Q9Y3T6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 AC099336.1-202ENST00000602961 463 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms