Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LEMD3Q9Y2U8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
LEMD3Q9Y2U8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
LEMD3Q9Y2U8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 CETN4P-206ENST00000642099 2168 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 PIN1P1-201ENST00000412108 996 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 AC105021.1-202ENST00000570572 669 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 TEX28P1-201ENST00000613479 1221 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 TEX28P2-201ENST00000617764 1221 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 PP12613-201ENST00000424958 2230 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 AC087499.5-201ENST00000452760 1342 ntBASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.2■□□□□ 0.82
LEMD3Q9Y2U8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 RNA5SP410-201ENST00000516285 106 ntBASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 BANF1P1-201ENST00000553684 263 ntBASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AL391256.1-201ENST00000443260 1855 ntBASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.19■□□□□ 0.82
LEMD3Q9Y2U8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LEMD3Q9Y2U8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms