Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 AL590627.1-203ENST00000421194 1026 ntBASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 HCG4B-203ENST00000450128 991 ntBASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 AC034105.1-201ENST00000563488 319 ntBASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP4E1Q9UPM8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 AC124067.4-201ENST00000519691 2379 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 CROCCP1-201ENST00000426910 5675 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 AC079328.2-201ENST00000561241 3354 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 RPL13AP23-201ENST00000480739 586 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
AP4E1Q9UPM8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AP4E1Q9UPM8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP4E1Q9UPM8 KRT8P39-201ENST00000396270 1433 ntBASIC17.39■□□□□ 0.38
AP4E1Q9UPM8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 TNRC18P3-201ENST00000441896 2691 ntBASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 AC012569.1-201ENST00000591191 1524 ntBASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 AL513480.1-201ENST00000451731 511 ntBASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 AC120114.3-201ENST00000611923 658 ntBASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 AC010507.1-201ENST00000633895 436 ntBASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.39■□□□□ 0.37
AP4E1Q9UPM8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms