Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPH3ALQ9UNE2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 KRT17P2-201ENST00000300992 1314 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ECEL1P3-201ENST00000427961 737 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 RASA4DP-201ENST00000460726 1199 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 AC010947.1-201ENST00000623454 693 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RPH3ALQ9UNE2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RPH3ALQ9UNE2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms