Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PCDHB19P-201ENST00000570871 2371 ntBASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLIP2Q9UDT6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 AC092902.6-201ENST00000641783 218 ntBASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLIP2Q9UDT6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 SNHG9-202ENST00000564014 471 ntBASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLIP2Q9UDT6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLIP2Q9UDT6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms