Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SUZ12P1-203ENST00000578195 985 ntBASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 AL031963.3-201ENST00000606441 850 ntBASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 AC132938.6-201ENST00000623828 1655 ntBASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 AL357140.3-201ENST00000639753 1983 ntBASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC093525.9-201ENST00000624961 1746 ntBASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 REXO1L1P-201ENST00000379010 6598 ntBASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 AC089987.1-201ENST00000551654 2209 ntBASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDC42SE1Q9NRR8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms