Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 AC008764.6-201ENST00000595909 2069 ntBASIC17.7■□□□□ 0.42
TLR9Q9NR96 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 AC009477.1-201ENST00000452936 217 ntBASIC17.7■□□□□ 0.42
TLR9Q9NR96 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 MIR4492-201ENST00000581627 80 ntBASIC17.7■□□□□ 0.42
TLR9Q9NR96 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 SLC25A1P3-201ENST00000395415 828 ntBASIC17.69■□□□□ 0.42
TLR9Q9NR96 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TLR9Q9NR96 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TLR9Q9NR96 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 FOXO1B-201ENST00000504678 1527 ntBASIC17.68■□□□□ 0.42
TLR9Q9NR96 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TLR9Q9NR96 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.68■□□□□ 0.42
TLR9Q9NR96 TEX28P1-201ENST00000613479 1221 ntBASIC17.68■□□□□ 0.42
TLR9Q9NR96 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms