Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 AC145285.6-201ENST00000604632 637 ntBASIC15.33■□□□□ 0.04
HMG20AQ9NP66 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 AC141257.4-201ENST00000634557 245 ntBASIC15.33■□□□□ 0.04
HMG20AQ9NP66 AC136944.6-201ENST00000634818 245 ntBASIC15.33■□□□□ 0.04
HMG20AQ9NP66 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.04
HMG20AQ9NP66 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.33■□□□□ 0.04
HMG20AQ9NP66 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AC087499.1-201ENST00000418141 1075 ntBASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMG20AQ9NP66 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 PVRIG2P-201ENST00000435460 978 ntBASIC15.31■□□□□ 0.04
HMG20AQ9NP66 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 AL138966.2-201ENST00000621997 464 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms