Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 FGFR3P6-201ENST00000457012 610 ntBASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 AL355877.3-201ENST00000622820 899 ntBASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 KRT8P39-201ENST00000396270 1433 ntBASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBB1Q9H4B7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 AC105917.1-201ENST00000506637 2539 ntBASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 SLC22A20-204ENST00000530038 1673 ntBASIC16.18■□□□□ 0.18
TUBB1Q9H4B7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 AC139887.3-201ENST00000568585 713 ntBASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 MTDHP4-201ENST00000600287 670 ntBASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBB1Q9H4B7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBB1Q9H4B7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBB1Q9H4B7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TUBB1Q9H4B7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TUBB1Q9H4B7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms