Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIPK3Q9H422 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.23■□□□□ 0.51
HIPK3Q9H422 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 DFFBP1-201ENST00000433250 979 ntBASIC18.22■□□□□ 0.51
HIPK3Q9H422 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 RN7SL752P-201ENST00000463779 287 ntBASIC18.22■□□□□ 0.51
HIPK3Q9H422 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 AC105021.1-202ENST00000570572 669 ntBASIC18.22■□□□□ 0.51
HIPK3Q9H422 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 AC017083.2-201ENST00000608069 979 ntBASIC18.22■□□□□ 0.51
HIPK3Q9H422 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIPK3Q9H422 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.22■□□□□ 0.51
HIPK3Q9H422 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 AL512384.1-201ENST00000406683 331 ntBASIC18.21■□□□□ 0.51
HIPK3Q9H422 AC087499.6-201ENST00000411576 835 ntBASIC18.21■□□□□ 0.51
HIPK3Q9H422 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 AC104794.3-201ENST00000566840 1248 ntBASIC18.21■□□□□ 0.51
HIPK3Q9H422 MIR6799-201ENST00000620297 69 ntBASIC18.21■□□□□ 0.51
HIPK3Q9H422 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIPK3Q9H422 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.21■□□□□ 0.51
HIPK3Q9H422 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.21■□□□□ 0.5
HIPK3Q9H422 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
HIPK3Q9H422 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.21■□□□□ 0.5
HIPK3Q9H422 BTBD7P1-201ENST00000447253 1453 ntBASIC18.2■□□□□ 0.5
HIPK3Q9H422 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK3Q9H422 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIPK3Q9H422 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.2■□□□□ 0.5
HIPK3Q9H422 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.2■□□□□ 0.5
HIPK3Q9H422 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms