Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 TERC-201ENST00000602385 541 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AC099336.1-202ENST00000602961 463 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AL591684.3-201ENST00000605187 298 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AL353135.1-201ENST00000606729 504 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 NCF1C-201ENST00000438382 1427 ntBASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
POLR2J3Q9H1A7 ALOX12P2-203ENST00000570921 1945 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AC091076.1-201ENST00000610741 619 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AL590787.1-201ENST00000568856 1315 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AP005117.1-201ENST00000584346 1413 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AC006538.1-201ENST00000567905 1585 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 AC007950.2-201ENST00000615045 2347 ntBASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
POLR2J3Q9H1A7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.55■□□□□ 0.08
POLR2J3Q9H1A7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms