Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PP12613-201ENST00000424958 2230 ntBASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP3Q9BWW4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 RPS8P6-201ENST00000426177 609 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 ACTG1P14-201ENST00000446382 1122 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC112191.1-201ENST00000523689 701 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 MIR4515-201ENST00000584082 81 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC091812.2-201ENST00000619081 385 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 AC134684.3-201ENST00000641758 218 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 ELL2P1-201ENST00000413990 1906 ntBASIC14.02□□□□□ -0.17
SSBP3Q9BWW4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC012569.1-201ENST00000591191 1524 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 HCG4-201ENST00000418983 998 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CEND1P1-201ENST00000451006 455 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 YBX1P5-201ENST00000509441 847 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC124947.2-201ENST00000547118 1133 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC091167.2-201ENST00000579581 588 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC141586.5-201ENST00000624546 2050 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AC022211.2-201ENST00000585075 2527 ntBASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP3Q9BWW4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms