Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AC106820.2-201ENST00000563775 3264 ntBASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.45■□□□□ 0.38
TRIM62Q9BVG3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 FAM58CP-201ENST00000435741 640 ntBASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AC005829.1-201ENST00000570002 483 ntBASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AC020765.3-201ENST00000613051 740 ntBASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 AD000864.1-201ENST00000624076 2295 ntBASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM62Q9BVG3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SNX33P1-201ENST00000592116 1762 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 KRT18P13-201ENST00000400056 1290 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 UPF3AP3-201ENST00000420996 769 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 RN7SL589P-201ENST00000481268 310 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AC092865.5-201ENST00000545435 363 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AL603756.1-201ENST00000606511 2163 ntBASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM62Q9BVG3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms