Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 AP000550.4-202ENST00000639755 178 ntBASIC10.08□□□□□ -0.8
LIMD2Q9BT23 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 LINC02228-204ENST00000642115 2962 ntBASIC10.08□□□□□ -0.8
LIMD2Q9BT23 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LIMD2Q9BT23 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC046185.3-201ENST00000623228 1824 ntBASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC010460.3-201ENST00000511359 1579 ntBASIC10.07□□□□□ -0.8
LIMD2Q9BT23 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 STK19B-204ENST00000512515 211 ntBASIC10.07□□□□□ -0.8
LIMD2Q9BT23 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LIMD2Q9BT23 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms