Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ARID3AQ99856 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ARID3AQ99856 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 MTCL1P1-201ENST00000446207 792 ntBASIC19.21■□□□□ 0.67
ARID3AQ99856 RN7SL606P-201ENST00000472779 293 ntBASIC19.21■□□□□ 0.67
ARID3AQ99856 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.21■□□□□ 0.67
ARID3AQ99856 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.21■□□□□ 0.67
ARID3AQ99856 AC104581.4-201ENST00000623126 3052 ntBASIC19.21■□□□□ 0.67
ARID3AQ99856 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.21■□□□□ 0.67
ARID3AQ99856 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.21■□□□□ 0.67
ARID3AQ99856 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.21■□□□□ 0.67
ARID3AQ99856 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.21■□□□□ 0.67
ARID3AQ99856 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ARID3AQ99856 AC009949.1-201ENST00000623048 1830 ntBASIC19.21■□□□□ 0.67
ARID3AQ99856 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARID3AQ99856 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
ARID3AQ99856 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.2■□□□□ 0.66
ARID3AQ99856 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
ARID3AQ99856 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ARID3AQ99856 AC091076.1-201ENST00000610741 619 ntBASIC19.2■□□□□ 0.66
ARID3AQ99856 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ARID3AQ99856 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 AC092171.3-201ENST00000610122 2651 ntBASIC19.2■□□□□ 0.66
ARID3AQ99856 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ARID3AQ99856 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ARID3AQ99856 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARID3AQ99856 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.19■□□□□ 0.66
ARID3AQ99856 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.19■□□□□ 0.66
ARID3AQ99856 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ARID3AQ99856 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ARID3AQ99856 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ARID3AQ99856 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 CICP4-201ENST00000447359 2812 ntBASIC19.19■□□□□ 0.66
ARID3AQ99856 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARID3AQ99856 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 BX276092.5-203ENST00000456199 560 ntBASIC19.19■□□□□ 0.66
ARID3AQ99856 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
ARID3AQ99856 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.19■□□□□ 0.66
ARID3AQ99856 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.19■□□□□ 0.66
ARID3AQ99856 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.19■□□□□ 0.66
ARID3AQ99856 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.19■□□□□ 0.66
ARID3AQ99856 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 PPP1R26P4-201ENST00000619065 3527 ntBASIC19.19■□□□□ 0.66
ARID3AQ99856 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ARID3AQ99856 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 AC022898.2-201ENST00000616822 1312 ntBASIC19.19■□□□□ 0.66
ARID3AQ99856 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ARID3AQ99856 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARID3AQ99856 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
ARID3AQ99856 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ARID3AQ99856 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARID3AQ99856 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms