Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.37■□□□□ 0.37
HAPLN3Q96S86 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 PDPK2P-202ENST00000562415 1191 ntBASIC17.37■□□□□ 0.37
HAPLN3Q96S86 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 SNX33P1-201ENST00000592116 1762 ntBASIC17.37■□□□□ 0.37
HAPLN3Q96S86 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 KRT8P39-201ENST00000396270 1433 ntBASIC17.37■□□□□ 0.37
HAPLN3Q96S86 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HAPLN3Q96S86 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 RNF216P1-203ENST00000404404 2427 ntBASIC17.36■□□□□ 0.37
HAPLN3Q96S86 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AC074386.1-202ENST00000463561 864 ntBASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AL513190.1-201ENST00000621254 727 ntBASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AC092865.6-201ENST00000642101 219 ntBASIC17.36■□□□□ 0.37
HAPLN3Q96S86 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
HAPLN3Q96S86 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 AL603756.1-201ENST00000606511 2163 ntBASIC17.35■□□□□ 0.37
HAPLN3Q96S86 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.35■□□□□ 0.37
HAPLN3Q96S86 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 HLA-J-202ENST00000469281 1241 ntBASIC17.35■□□□□ 0.37
HAPLN3Q96S86 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.35■□□□□ 0.37
HAPLN3Q96S86 MIR3909-201ENST00000579518 119 ntBASIC17.35■□□□□ 0.37
HAPLN3Q96S86 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms