Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AC125634.1-201ENST00000438758 1403 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AC005332.3-201ENST00000589904 676 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 AL390719.2-201ENST00000606993 987 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AC002310.6-201ENST00000624451 1377 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AC126177.1-201ENST00000547829 2218 ntBASIC13.67□□□□□ -0.22
RAB40CQ96S21 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40CQ96S21 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB40CQ96S21 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40CQ96S21 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40CQ96S21 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40CQ96S21 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40CQ96S21 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms