Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRAMP1Q96RY5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SERBP1P3-201ENST00000459980 809 ntBASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SPDYE18-201ENST00000510091 1050 ntBASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AC061975.2-201ENST00000581722 295 ntBASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 AC008494.3-201ENST00000606615 944 ntBASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRAMP1Q96RY5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AC079776.1-201ENST00000401540 1152 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AC011495.1-201ENST00000498085 584 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AC132938.2-201ENST00000579188 680 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AL033527.5-202ENST00000641632 1098 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AL591163.1-201ENST00000641757 987 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 SLC7A15P-201ENST00000424028 1363 ntBASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRAMP1Q96RY5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 AL589702.1-201ENST00000641229 1509 ntBASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 CROCCP2-202ENST00000412962 2773 ntBASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 WASH4P-201ENST00000564273 1246 ntBASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 AC106886.1-201ENST00000568660 600 ntBASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.27■□□□□ 0.84
CRAMP1Q96RY5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms