Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.59■□□□□ 0.89
NLRP3Q96P20 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRP3Q96P20 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRP3Q96P20 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NLRP3Q96P20 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.59■□□□□ 0.89
NLRP3Q96P20 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NLRP3Q96P20 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 RNA5SP410-201ENST00000516285 106 ntBASIC20.58■□□□□ 0.89
NLRP3Q96P20 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 AC105021.1-202ENST00000570572 669 ntBASIC20.58■□□□□ 0.89
NLRP3Q96P20 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.58■□□□□ 0.89
NLRP3Q96P20 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NLRP3Q96P20 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
NLRP3Q96P20 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NLRP3Q96P20 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.57■□□□□ 0.88
NLRP3Q96P20 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRP3Q96P20 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRP3Q96P20 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRP3Q96P20 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRP3Q96P20 AL844908.2-201ENST00000609461 460 ntBASIC20.56■□□□□ 0.88
NLRP3Q96P20 AC008738.7-201ENST00000609744 511 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms