Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC055876.3-201ENST00000431496 288 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC125807.1-201ENST00000483097 614 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 RNA5SP421-201ENST00000516864 134 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 RARRES2P9-201ENST00000565168 469 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 MIR3197-201ENST00000582241 73 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC092364.2-202ENST00000597012 1073 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AL390955.2-201ENST00000603032 514 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC138649.4-201ENST00000612222 287 ntBASIC19.47■□□□□ 0.71
CCDC17Q96LX7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC17Q96LX7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 AP3S2-216ENST00000617003 1561 ntBASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 FAM8A3P-201ENST00000427218 844 ntBASIC19.46■□□□□ 0.71
CCDC17Q96LX7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 BCRP1-201ENST00000444246 691 ntBASIC19.46■□□□□ 0.71
CCDC17Q96LX7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC17Q96LX7 FOXO1B-201ENST00000504678 1527 ntBASIC19.46■□□□□ 0.71
CCDC17Q96LX7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AL512652.2-201ENST00000625156 1716 ntBASIC19.45■□□□□ 0.7
CCDC17Q96LX7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 MIR943-201ENST00000401286 94 ntBASIC19.45■□□□□ 0.7
CCDC17Q96LX7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AC020765.3-201ENST00000613051 740 ntBASIC19.45■□□□□ 0.7
CCDC17Q96LX7 AC018529.1-201ENST00000613063 361 ntBASIC19.45■□□□□ 0.7
CCDC17Q96LX7 SPTSSB-204ENST00000617024 1292 ntBASIC19.45■□□□□ 0.7
CCDC17Q96LX7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC17Q96LX7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC17Q96LX7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms