Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 AL512652.2-201ENST00000625156 1716 ntBASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 AL590787.1-201ENST00000568856 1315 ntBASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.5■□□□□ 0.71
CHAMP1Q96JM3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 AC064862.7-201ENST00000604520 867 ntBASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 AL121956.5-201ENST00000625261 221 ntBASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 AC006277.1-201ENST00000624348 1610 ntBASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 PRAL-201ENST00000624952 3286 ntBASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.49■□□□□ 0.71
CHAMP1Q96JM3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 BX005266.1-201ENST00000473402 457 ntBASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC074051.2-201ENST00000565115 352 ntBASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AP000550.4-202ENST00000639755 178 ntBASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHAMP1Q96JM3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 GGT3P-204ENST00000453783 1664 ntBASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHAMP1Q96JM3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms