Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX11Q96FC9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX11Q96FC9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 PMS2P2-201ENST00000425039 1128 ntBASIC19.95■□□□□ 0.78
DDX11Q96FC9 DNAJB3-202ENST00000449667 1266 ntBASIC19.95■□□□□ 0.78
DDX11Q96FC9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX11Q96FC9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
DDX11Q96FC9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 HCG4B-203ENST00000450128 991 ntBASIC19.94■□□□□ 0.78
DDX11Q96FC9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 AC092865.6-201ENST00000642101 219 ntBASIC19.94■□□□□ 0.78
DDX11Q96FC9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX11Q96FC9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.94■□□□□ 0.78
DDX11Q96FC9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX11Q96FC9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 PCDHB19P-201ENST00000570871 2371 ntBASIC19.93■□□□□ 0.78
DDX11Q96FC9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms