Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RNF183Q96D59 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RNF183Q96D59 AC004832.2-201ENST00000426397 482 ntBASIC12.52□□□□□ -0.41
RNF183Q96D59 HCG4B-203ENST00000450128 991 ntBASIC12.52□□□□□ -0.41
RNF183Q96D59 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.52□□□□□ -0.41
RNF183Q96D59 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF183Q96D59 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF183Q96D59 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF183Q96D59 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
RNF183Q96D59 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.52□□□□□ -0.41
RNF183Q96D59 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF183Q96D59 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RNF183Q96D59 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.52□□□□□ -0.41
RNF183Q96D59 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RNF183Q96D59 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
RNF183Q96D59 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
RNF183Q96D59 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 YBX2P1-201ENST00000394192 760 ntBASIC12.51□□□□□ -0.41
RNF183Q96D59 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC023274.1-201ENST00000418278 595 ntBASIC12.51□□□□□ -0.41
RNF183Q96D59 UPF3AP3-201ENST00000420996 769 ntBASIC12.51□□□□□ -0.41
RNF183Q96D59 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.51□□□□□ -0.41
RNF183Q96D59 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 MTDHP5-201ENST00000598980 586 ntBASIC12.51□□□□□ -0.41
RNF183Q96D59 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.51□□□□□ -0.41
RNF183Q96D59 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 AC133963.1-201ENST00000504166 1679 ntBASIC12.51□□□□□ -0.41
RNF183Q96D59 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RNF183Q96D59 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
RNF183Q96D59 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RNF183Q96D59 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RNF183Q96D59 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF183Q96D59 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms