Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 AL583810.1-201ENST00000553344 1045 ntBASIC18■□□□□ 0.47
TRIM43Q96BQ3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 TMEM261P1-201ENST00000604899 340 ntBASIC18■□□□□ 0.47
TRIM43Q96BQ3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 AL033527.5-201ENST00000641382 801 ntBASIC18■□□□□ 0.47
TRIM43Q96BQ3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM43Q96BQ3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 SPDYE17-201ENST00000412399 783 ntBASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 BCYRN1-201ENST00000418539 200 ntBASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 RN7SL219P-201ENST00000582872 296 ntBASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 AC068587.10-201ENST00000641210 219 ntBASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM43Q96BQ3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 BOLA2P3-201ENST00000404566 256 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AC015936.2-201ENST00000593177 259 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 BTNL10-201ENST00000595971 695 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 MIR8072-201ENST00000614241 80 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms