Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HPS1Q92902 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HPS1Q92902 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HPS1Q92902 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HPS1Q92902 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.46■□□□□ 0.07
HPS1Q92902 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HPS1Q92902 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.46■□□□□ 0.07
HPS1Q92902 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 AC079602.3-201ENST00000623931 403 ntBASIC15.46■□□□□ 0.07
HPS1Q92902 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HPS1Q92902 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 PHGDH-209ENST00000641074 1780 ntBASIC15.46■□□□□ 0.07
HPS1Q92902 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
HPS1Q92902 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HPS1Q92902 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HPS1Q92902 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
HPS1Q92902 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HPS1Q92902 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.46■□□□□ 0.06
HPS1Q92902 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HPS1Q92902 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
HPS1Q92902 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HPS1Q92902 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
HPS1Q92902 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HPS1Q92902 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 AC012497.1-201ENST00000429392 575 ntBASIC15.45■□□□□ 0.06
HPS1Q92902 NUS1P1-201ENST00000446295 882 ntBASIC15.45■□□□□ 0.06
HPS1Q92902 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.45■□□□□ 0.06
HPS1Q92902 AC111152.3-201ENST00000569699 673 ntBASIC15.45■□□□□ 0.06
HPS1Q92902 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HPS1Q92902 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 AP003400.6-201ENST00000624698 740 ntBASIC15.45■□□□□ 0.06
HPS1Q92902 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HPS1Q92902 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.45■□□□□ 0.06
HPS1Q92902 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HPS1Q92902 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 GMCL1P1-201ENST00000463439 1581 ntBASIC15.45■□□□□ 0.06
HPS1Q92902 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.45■□□□□ 0.06
HPS1Q92902 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.44■□□□□ 0.06
HPS1Q92902 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.44■□□□□ 0.06
HPS1Q92902 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HPS1Q92902 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms