Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC9Q92623 MIR6752-201ENST00000618442 71 ntBASIC16.02■□□□□ 0.16
TTC9Q92623 AP001059.3-201ENST00000619053 235 ntBASIC16.02■□□□□ 0.16
TTC9Q92623 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.02■□□□□ 0.16
TTC9Q92623 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.02■□□□□ 0.15
TTC9Q92623 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.02■□□□□ 0.15
TTC9Q92623 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TTC9Q92623 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TTC9Q92623 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 AC046185.3-201ENST00000623228 1824 ntBASIC16.01■□□□□ 0.15
TTC9Q92623 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TTC9Q92623 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 AC097637.2-201ENST00000624096 1997 ntBASIC16.01■□□□□ 0.15
TTC9Q92623 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 AC002056.1-201ENST00000395613 760 ntBASIC16.01■□□□□ 0.15
TTC9Q92623 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC9Q92623 FAM185BP-201ENST00000443595 716 ntBASIC16.01■□□□□ 0.15
TTC9Q92623 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC9Q92623 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TTC9Q92623 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TTC9Q92623 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TTC9Q92623 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.01■□□□□ 0.15
TTC9Q92623 LYSMD4-203ENST00000378904 2122 ntBASIC16.01■□□□□ 0.15
TTC9Q92623 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TTC9Q92623 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.01■□□□□ 0.15
TTC9Q92623 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.01■□□□□ 0.15
TTC9Q92623 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TTC9Q92623 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 AC011676.5-201ENST00000624864 2660 ntBASIC16■□□□□ 0.15
TTC9Q92623 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 AC107890.1-201ENST00000422478 521 ntBASIC16■□□□□ 0.15
TTC9Q92623 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16■□□□□ 0.15
TTC9Q92623 CRB3P1-201ENST00000449338 276 ntBASIC16■□□□□ 0.15
TTC9Q92623 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 FAM86C2P-203ENST00000528684 1004 ntBASIC16■□□□□ 0.15
TTC9Q92623 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 AL358472.5-202ENST00000641448 1267 ntBASIC16■□□□□ 0.15
TTC9Q92623 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16■□□□□ 0.15
TTC9Q92623 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16■□□□□ 0.15
TTC9Q92623 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TTC9Q92623 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC9Q92623 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC9Q92623 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC9Q92623 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.99■□□□□ 0.15
TTC9Q92623 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TTC9Q92623 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TTC9Q92623 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms