Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PTCD2Q8WV60 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
PTCD2Q8WV60 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 PGAM5P1-201ENST00000518923 814 ntBASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTCD2Q8WV60 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 MED15P5-201ENST00000423150 992 ntBASIC17.04■□□□□ 0.32
PTCD2Q8WV60 EIF2S2P5-201ENST00000457635 968 ntBASIC17.04■□□□□ 0.32
PTCD2Q8WV60 AC108073.2-201ENST00000464002 357 ntBASIC17.04■□□□□ 0.32
PTCD2Q8WV60 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 AL805961.1-202ENST00000641562 540 ntBASIC17.04■□□□□ 0.32
PTCD2Q8WV60 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTCD2Q8WV60 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC006277.1-201ENST00000624348 1610 ntBASIC17.03■□□□□ 0.32
PTCD2Q8WV60 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 KRT18P2-201ENST00000447938 1258 ntBASIC17.03■□□□□ 0.32
PTCD2Q8WV60 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 IGHV3-65-201ENST00000523210 341 ntBASIC17.03■□□□□ 0.32
PTCD2Q8WV60 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC027601.4-201ENST00000611259 610 ntBASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC004790.2-201ENST00000623588 572 ntBASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTCD2Q8WV60 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms