Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 AC122714.2-201ENST00000502787 707 ntBASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 DUX4L17-201ENST00000557360 1267 ntBASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 MIR4497-201ENST00000583208 89 ntBASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 AC141257.4-201ENST00000634557 245 ntBASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 AC136944.6-201ENST00000634818 245 ntBASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CNIH3Q8TBE1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 PRAL-201ENST00000624952 3286 ntBASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 STK19B-204ENST00000512515 211 ntBASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ZNF444P1-201ENST00000559497 298 ntBASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 NAPSB-206ENST00000562112 1266 ntBASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 AP005117.1-202ENST00000581724 1908 ntBASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CNIH3Q8TBE1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 GGT4P-201ENST00000623672 1708 ntBASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 AC022532.1-201ENST00000624563 1728 ntBASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CNIH3Q8TBE1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms