Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHKBP1Q8TBC3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 CROCCP2-202ENST00000412962 2773 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC046158.3-201ENST00000624947 2558 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC016396.2-201ENST00000562575 1417 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC067863.1-201ENST00000494933 530 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AL512356.2-201ENST00000546955 174 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC091167.2-201ENST00000579581 588 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AP001059.3-201ENST00000619053 235 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 AL118508.1-201ENST00000613502 2345 ntBASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SHKBP1Q8TBC3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SHKBP1Q8TBC3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SHKBP1Q8TBC3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
SHKBP1Q8TBC3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 RNU1-129P-201ENST00000384064 167 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CNN2P2-201ENST00000443536 909 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CNN2P3-201ENST00000450201 906 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 U1.21-201ENST00000580816 167 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 AL031055.1-201ENST00000606362 631 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 AL136317.3-201ENST00000618497 906 ntBASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SHKBP1Q8TBC3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 IGHV3-62-201ENST00000520057 340 ntBASIC17.57■□□□□ 0.4
SHKBP1Q8TBC3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms