Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LMO3Q8TAP4 AC026691.1-201ENST00000602502 2017 ntBASIC17.93■□□□□ 0.46
LMO3Q8TAP4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 PCGF3-213ENST00000620529 1899 ntBASIC17.92■□□□□ 0.46
LMO3Q8TAP4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 AL391005.1-201ENST00000623953 2435 ntBASIC17.92■□□□□ 0.46
LMO3Q8TAP4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 MTHFR-217ENST00000641820 1569 ntBASIC17.92■□□□□ 0.46
LMO3Q8TAP4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.92■□□□□ 0.46
LMO3Q8TAP4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO3Q8TAP4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.91■□□□□ 0.46
LMO3Q8TAP4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AC018845.2-201ENST00000568326 409 ntBASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 AL031055.1-201ENST00000606362 631 ntBASIC17.91■□□□□ 0.46
LMO3Q8TAP4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO3Q8TAP4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms