Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC002310.6-201ENST00000624451 1377 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AL365209.1-201ENST00000624418 6473 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AL135999.2-201ENST00000622438 1686 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC006058.3-201ENST00000606217 1069 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC010653.2-201ENST00000623505 997 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 LINC00895-201ENST00000629028 1637 ntBASIC12.59□□□□□ -0.39
NUP35Q8NFH5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
NUP35Q8NFH5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
NUP35Q8NFH5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NUP35Q8NFH5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms