Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
RTL9Q8NET4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTL9Q8NET4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 AP005018.1-201ENST00000525475 301 ntBASIC20.52■□□□□ 0.88
RTL9Q8NET4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTL9Q8NET4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 AC141586.5-201ENST00000624546 2050 ntBASIC20.52■□□□□ 0.88
RTL9Q8NET4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RTL9Q8NET4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTL9Q8NET4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.52■□□□□ 0.87
RTL9Q8NET4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 TSSK5P-201ENST00000423978 907 ntBASIC20.51■□□□□ 0.87
RTL9Q8NET4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 GAPDHP21-201ENST00000450301 1010 ntBASIC20.51■□□□□ 0.87
RTL9Q8NET4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 HTR7P1-202ENST00000624664 4411 ntBASIC20.51■□□□□ 0.87
RTL9Q8NET4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL9Q8NET4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL9Q8NET4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 AC004890.2-204ENST00000481968 304 ntBASIC20.5■□□□□ 0.87
RTL9Q8NET4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 SPDYE12P-201ENST00000618416 771 ntBASIC20.5■□□□□ 0.87
RTL9Q8NET4 AC073592.8-201ENST00000624126 511 ntBASIC20.5■□□□□ 0.87
RTL9Q8NET4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RTL9Q8NET4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL9Q8NET4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms