Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AC098831.1-202ENST00000438821 336 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AC108073.2-201ENST00000464002 357 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 MPDU1-223ENST00000582151 728 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AL049840.3-201ENST00000602669 611 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AC116407.3-201ENST00000623905 1129 ntBASIC16.23■□□□□ 0.19
KRT78Q8N1N4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
KRT78Q8N1N4 AL353732.1-201ENST00000569618 1459 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC009078.2-202ENST00000463353 338 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC108751.1-201ENST00000490852 363 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC005412.3-201ENST00000580309 715 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AC004790.2-201ENST00000623588 572 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AP001350.2-201ENST00000625104 1094 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 AL139011.1-202ENST00000642063 584 ntBASIC16.22■□□□□ 0.19
KRT78Q8N1N4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT78Q8N1N4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 PRSS29P-201ENST00000440800 595 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms