Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VPS52Q8N1B4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.22■□□□□ 0.51
VPS52Q8N1B4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AL023806.1-201ENST00000603994 1649 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 FAM86GP-201ENST00000448322 971 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SPDYE11-202ENST00000450699 704 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 KRT8P48-201ENST00000515599 1220 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AC107918.2-201ENST00000530817 355 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SPDYE9P-201ENST00000570642 692 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SPDYE10P-202ENST00000612005 668 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SPDYE8P-202ENST00000612377 668 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AC108860.2-201ENST00000562760 2183 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AC080080.1-201ENST00000625121 2420 ntBASIC18.21■□□□□ 0.51
VPS52Q8N1B4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VPS52Q8N1B4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VPS52Q8N1B4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 AC005237.2-201ENST00000434368 219 ntBASIC18.2■□□□□ 0.5
VPS52Q8N1B4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 AC009093.7-201ENST00000623853 1223 ntBASIC18.2■□□□□ 0.5
VPS52Q8N1B4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.2■□□□□ 0.5
VPS52Q8N1B4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms