Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL27A1Q8IZC6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL27A1Q8IZC6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
COL27A1Q8IZC6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 AL162274.1-201ENST00000617191 1098 ntBASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.54■□□□□ 0.08
COL27A1Q8IZC6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 EEF1DP4-201ENST00000446006 880 ntBASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 WFDC1-204ENST00000613603 549 ntBASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 MIR6805-201ENST00000615055 62 ntBASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL27A1Q8IZC6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 KRT17P8-201ENST00000540749 863 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 AC025048.3-201ENST00000590609 569 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 AC005702.4-201ENST00000618393 416 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 AC068880.1-201ENST00000507289 2297 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 AC060834.1-201ENST00000443027 2032 ntBASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL27A1Q8IZC6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 AC007389.4-201ENST00000454674 793 ntBASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 SERBP1P3-201ENST00000459980 809 ntBASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 AC123567.1-201ENST00000548294 1261 ntBASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 MIR4259-201ENST00000584466 101 ntBASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.52■□□□□ 0.07
COL27A1Q8IZC6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms